A

additional reading

assignments, displaying

B

back-calculated spectrum, plotting

baseline correction 1, 2, 3

Blake 1, 2

C

Chemical Shift Index, calculating

clipboard list, copying to a pattern

contour level

coordinates, redefining

cross peak footprints

using database to list

cross peaks

finding 1, 2

D

D2 dimension, transforming

data matrices, for Assign tutorials

database

checking file structure

creating a new file

generating 2D cross peaks

modifying schema

passing data into and out of

querying for entity information

setting up 1, 2, 3

submitting a query

using to change the value of an element

using to load the value of an element

utilities tutorial

viewing entity contents

viewing entity with tables

DC offset, removing

display parameters, changing

display, adjusting

DQF-COSY spectra

E

entities, building

experiments

adding to project

F

FID

frames, creating

frequencies

displaying 1, 2

frequency collapse tolerance

H

heteronuclear NOE's, evaluating

L

library

accessing and defining

M

matrix

opening 1, 2

two-dimensional

Modelfree input, generating

N

neighbor detection, verifying result

neighbor searches, performing

NMR spectrum assignment

NOE peaks, checking

NOESY spectrum, back-calculating

O

one-dimensional data processing

P

patterns

matching against known AA sequence

peak assignments, generating automatically

peak heights, measuring

in assignment procedure

peaks

coloring based on prototype patterns

reading in 1, 2, 3

phasing adjustment

plot

project

adding experiments to

protons, finding corresponding crosspeaks to

prototype pattern

copying directly to a spin system

copying to a spin system

copying to clipboard 1, 2

creating tile plot 1, 2

detection 1, 2

visualizing 1, 2

writing collection to file 1, 2

R

real-time interface, accessing

resonances, viewing and examining

restraints

defining and generating

S

scalar peak, assigning

scaling peak, choosing

sequence-specific assignments

generating 1, 2

sequential assignment, visualizing

sequential connectivities

signal/noise ratio, evaluating

slices, plotting

spectra

drawing 1, 2

magnifying display of

phase correcting

selecting 1, 2

spectrum-specific shifts

spectrum-specific tolerances

spin system, adding to patterns

spreadsheet, viewing entity with 1, 2

stretches, using in assignment

strip plots, using 1, 2

T

3D peak picking

three-dimensional data, transforming

threshold, adjusting

time course, viewing

TOCSY

transforming data

2D cross peaks, using database to generate

2D data, processing

typographical conventions

V

volumes, calculating

W

workstation requirements

Z

Index