A

additional reading
annotation
assignments, displaying

B

back-calculated spectrum, plotting
baseline correction 1, 2, 3
Blake 1, 2

C

Chemical Shift Index, calculating
clipboard list, copying to a pattern
contour level
calculating
raising
contour plot
creating
updating
viewing
coordinates, redefining
cross peak footprints
using database to list
cross peaks
assigning
finding 1, 2

D

D2 dimension, transforming
data matrices, for Assign tutorials
database
checking file structure
creating a new file
generating 2D cross peaks
heirarchy
modifying schema
passing data into and out of
querying for entity information
reading in
setting up 1, 2, 3
submitting a query
using to change the value of an element
using to load the value of an element
utilities tutorial
viewing entity contents
viewing entity with tables
writing from
DC offset, removing
display parameters, changing
display, adjusting
DQF-COSY spectra

E

entities, building
experiments
adding to project
defining new

F

FID
apodizing
reading in
transforming
frames, creating
frequencies
assigning
displaying 1, 2
editing
frequency collapse tolerance

H

heteronuclear NOE's, evaluating

L

library
accessing and defining
defining

M

matrix
displaying
opening 1, 2
referencing
two-dimensional
Modelfree input, generating

N

neighbor detection, verifying result
neighbor searches, performing
NMR spectrum assignment
NOE peaks, checking
NOESY spectrum, back-calculating

O

one-dimensional data processing
advanced

P

patterns
connecting
matching against known AA sequence
scoring
peak assignments, generating automatically
peak heights, measuring
peak picking
in assignment procedure
peaks
coloring based on prototype patterns
deleting
listing
reading in 1, 2, 3
phasing adjustment
plot
contour
stacked
project
adding experiments to
protons, finding corresponding crosspeaks to
prototype pattern
collecting
copying directly to a spin system
copying to a spin system
copying to clipboard 1, 2
correcting
creating tile plot 1, 2
detection 1, 2
visualizing 1, 2
writing collection to file 1, 2

R

real-time interface, accessing
related books
resonances, viewing and examining
restraints
defining and generating
redefining

S

scalar peak, assigning
scaling peak, choosing
sequence-specific assignments
creating
generating 1, 2
sequential assignment, visualizing
sequential connectivities
signal/noise ratio, evaluating
slices, plotting
spectra
comparing
connecting
creating
drawing 1, 2
magnifying display of
phase correcting
phasing
replotting
selecting 1, 2
spectrum-specific shifts
adjusting
setting
spectrum-specific tolerances
spin system, adding to patterns
spreadsheet, viewing entity with 1, 2
stacked plot
stretches, using in assignment
strip plots, using 1, 2

T

3D peak picking
3D viewing
three-dimensional data, transforming
threshold, adjusting
time course, viewing
TOCSY
spectra
transforming data
2D cross peaks, using database to generate
2D data, processing
typographical conventions

V

volumes, calculating

W

workstation requirements

Z

Zn-rubredoxin

Index